16S rRNA gene seq of Mus musculus feces after human FMT - SRA

SRX23741470: 16S rRNA gene seq of Mus musculus feces after human FMT
1 ILLUMINA (Illumina MiSeq) run: 56,953 spots, 34.3M bases, 18.4Mb downloads

Design: Same design as in Kozich, et al. 2013, Applied Environmental Microbiology, except different 16S targeting sequences and linkers. Reads from standard Illumina sequencing primers, so that linkers + 16S rRNA primer sequences remain in Illumina reads (noted in forward and reverse primer field)

Submitted by: University of Utah School of Medicine

Study: Microbiota of ASD and neurotypical human and humanized-mouse fecal samples.

PRJNA952791 • SRP491755 • All experiments • All runs

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This project contains fecal 16S rRNA gene reads from individuals with ASD and their neurotypical family members and 16S reads from male progeny of initially germ-free breeder pairs colonized with these microbiotas. It also contains the whole genome sequencing reads (Illumina and Oxford Nanopore Tech) and assembly for the Blautia sp. isolate JLR.GB024.

Sample: Host_1487001_ASD

SAMN40139183 • SRS20568266 • All experiments • All runs

Organism: gut metagenome

Library:

Name: 15784X38

Instrument: Illumina MiSeq

Strategy: AMPLICON

Source: METAGENOMIC

Selection: PCR

Layout: PAIRED

Runs: 1 run, 56,953 spots, 34.3M bases, 18.4Mb

Run	# of Spots	# of Bases	Size	Published
SRR28095277	56,953	34.3M	18.4Mb	2024-02-26

ID:: 32031554

SRA

Sequence Read Archive

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